| Rank | Club / Country | Points | 1-yr change |
|---|---|---|---|
| 1 | Flora Tallinn Estonia | 1730 | 4 1721 |
| 2 | FCI Levadia Tallinn Estonia | 1659 | 11 1664 |
| 3 | Nomme Kalju FC (EST) Estonia | 1543 | 66 1582 |
| 4 | FC Infonet Tallinn Estonia | 1476 | 16 1476 |
| 5 | Sillamäe Kalev Estonia | 1462 | 11 1462 |
| 6 | Paide Linnameeskond Estonia | 1458 | 39 1466 |
| 7 | Narva Trans Estonia | 1315 | 218 1338 |
| 8 | Tammeka Estonia | 1273 | 31 1271 |
| 9 | Tallinna JK Legion Estonia | 1255 | 156 1266 |
| 10 | Tamme Auto Estonia | 1248 | 29 1248 |
| 11 | Warrior Estonia | 1247 | 29 1247 |
| 12 | Harju Jalgpallikool Estonia | 1239 | 192 1250 |
| 13 | FC Kuressaare Estonia | 1232 | 328 1194 |
| 14 | Johvi FC Lokomotiv Estonia | 1223 | 24 1223 |
| 15 | Tulevik Viljandi Estonia | 1216 | 22 1216 |
| 16 | Lootus Estonia | 1213 | 19 1213 |
| 17 | Maardu Linnameeskond Estonia | 1199 | 7 1199 |
| 18 | Rakvere JK Tarvas Estonia | 1190 | 7 1190 |
| 19 | Talinna Kalev Estonia | 1187 | 71 1138 |
| 20 | Paernu Linnameeskond Estonia | 1177 | 6 1177 |
| 21 | Ajax Lasnamäe Estonia | 1173 | 7 1173 |
| 22 | Pärnu JK Vaprus Estonia | 1144 | 2 1144 |