| 2001 | Mjøndalen IF Norway | 1245 | 47 1245 |
| 2002 | Underhill Zimbabwe | 1245 | 48 1245 |
| 2003 | Diaraf Senegal | 1244 | 48 1244 |
| 2004 | FC MK Congo DR | 1244 | 48 1244 |
| 2005 | FK Bačka Palanka Serbia | 1244 | 256 1263 |
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| 2006 | GOŠK Gabela Bosnia and Herzegovina | 1244 | 155 1234 |
| 2007 | MSP Batna Algeria | 1244 | 46 1244 |
| 2008 | Harbour View FC Jamaica | 1244 | 137 1235 |
| 2009 | Persijap Jepara Indonesia | 1244 | 45 1244 |
| 2010 | Ubon UMT FC Thailand | 1244 | 294 1266 |
| 2011 | Binh Duong Vietnam | 1244 | 44 1244 |
| 2012 | Persik Kediri Indonesia | 1244 | 45 1244 |
| 2013 | Al-Markhiya Sports Club Qatar | 1244 | 100 1250 |
| 2014 | Once Municipal El Salvador | 1244 | 44 1244 |
| 2015 | Skalica Slovakia | 1244 | 44 1244 |
| 2016 | Adzopé Ivory Coast | 1244 | 44 1244 |
| 2017 | Moossou FC Ivory Coast | 1244 | 180 1255 |
| 2018 | AC Rangers Denmark | 1243 | 105 1250 |
| 2019 | Saint-Clément Congo DR | 1243 | 42 1243 |
| 2020 | Tempête Haiti | 1243 | 43 1243 |
| 2021 | Kukesi Albania | 1243 | 44 1243 |
| 2022 | Ethnikos Achnas Cyprus | 1243 | 878 1324 |
| 2023 | Marist Solomon Islands | 1243 | 209 1227 |
| 2024 | Mbabane Swallows Sudan | 1243 | 111 1250 |
| 2025 | Neftchi Uzbekistan | 1243 | 301 1265 |
| 2026 | Araz PFK Azerbaijan | 1243 | 41 1243 |
| 2027 | Szolnoki MÁV Hungary | 1243 | 42 1243 |
| 2028 | El Nasr Tadeen Egypt | 1243 | 144 1252 |
| 2029 | Rewa Fiji | 1243 | 42 1243 |
| 2030 | Kabwe Warriors Zambia | 1243 | 41 1243 |
| 2031 | Sportist Svoge Bulgaria | 1243 | 41 1243 |
| 2032 | Vostok Kazakhstan | 1243 | 42 1243 |
| 2033 | Santos de Angola Angola | 1243 | 42 1243 |
| 2034 | Muungano Congo DR | 1242 | 7 1246 |
| 2035 | Alkali Nassara Niger | 1242 | 44 1242 |
| 2036 | FK Gorno Lisice Macedonia | 1242 | 45 1242 |
| 2037 | Salam Zgharta Lebanon | 1242 | 36 1243 |
| 2038 | Mont Bleu Denmark | 1242 | 125 1250 |
| 2039 | Shelbourne Ireland | 1242 | 45 1242 |
| 2040 | Kerala Blasters FC India | 1242 | 45 1242 |
| 2041 | Kalyani Bharat FC India | 1242 | 45 1242 |
| 2042 | Interblock Slovenia | 1242 | 45 1242 |
| 2043 | Haskovo 2009 Bulgaria | 1242 | 45 1242 |
| 2044 | Gokulam Kerala Fc India | 1241 | 131 1250 |
| 2045 | NK Zagreb Croatia | 1241 | 44 1241 |
| 2046 | Erakor Golden Star Vanuatu | 1241 | 57 1241 |
| 2047 | Kazakhmys Kazakhstan | 1241 | 43 1241 |
| 2048 | FH Hafnarfjordur Iceland | 1241 | 1 1245 |
| 2049 | Roan United Zambia | 1241 | 43 1241 |
| 2050 | Wassaman United Ghana | 1241 | 44 1241 |