| 2001 | Al Qadsia Kuwait | 1245 | 59 1245 |
| 2002 | Petro Souths Papua New Guinea | 1245 | 58 1245 |
| 2003 | Club Olympique de Médenine Tunisia | 1245 | 666 1300 |
| 2004 | Flame Lilly Zimbabwe | 1245 | 60 1245 |
| 2005 | Eleven Wise Ghana | 1245 | 60 1245 |
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| 2006 | PTT Rayong FC Thailand | 1245 | 114 1252 |
| 2007 | DSK Shivajians India | 1245 | 60 1245 |
| 2008 | Differdange 03 Luxembourg | 1245 | 62 1245 |
| 2009 | Olympique de Missira Mali | 1245 | 63 1245 |
| 2010 | Atlético do Namibe Angola | 1245 | 65 1245 |
| 2011 | Underhill Zimbabwe | 1245 | 67 1245 |
| 2012 | Diaraf Senegal | 1244 | 67 1244 |
| 2013 | FC MK Congo DR | 1244 | 67 1244 |
| 2014 | MSP Batna Algeria | 1244 | 67 1244 |
| 2015 | Persijap Jepara Indonesia | 1244 | 67 1244 |
| 2016 | Ubon UMT FC Thailand | 1244 | 288 1266 |
| 2017 | Binh Duong Vietnam | 1244 | 66 1244 |
| 2018 | Al Shorta Al Qadarif Sudan | 1244 | 93 1250 |
| 2019 | Lae City Dwellers Papua New Guinea | 1244 | 159 1235 |
| 2020 | Persik Kediri Indonesia | 1244 | 65 1244 |
| 2021 | Vitosha Bistritsa Bulgaria | 1244 | 1108 1350 |
| 2022 | Al-Markhiya Sports Club Qatar | 1244 | 97 1250 |
| 2023 | Once Municipal El Salvador | 1244 | 63 1244 |
| 2024 | Skalica Slovakia | 1244 | 63 1244 |
| 2025 | Adzopé Ivory Coast | 1244 | 63 1244 |
| 2026 | AC Rangers Denmark | 1243 | 101 1250 |
| 2027 | Saint-Clément Congo DR | 1243 | 62 1243 |
| 2028 | Tempête Haiti | 1243 | 63 1243 |
| 2029 | Kukesi Albania | 1243 | 64 1243 |
| 2030 | Ethnikos Achnas Cyprus | 1243 | 879 1324 |
| 2031 | St. Mirren Scotland | 1243 | 125 1238 |
| 2032 | Marist Solomon Islands | 1243 | 228 1227 |
| 2033 | Destroyers Bolivia | 1243 | 697 1300 |
| 2034 | AD Chalatenango El Salvador | 1243 | 219 1227 |
| 2035 | Mbabane Swallows Sudan | 1243 | 111 1250 |
| 2036 | Chiangmai FC Thailand | 1243 | 110 1250 |
| 2037 | Neftchi Uzbekistan | 1243 | 301 1265 |
| 2038 | Araz PFK Azerbaijan | 1243 | 57 1243 |
| 2039 | Black Leopards South Africa | 1243 | 168 1233 |
| 2040 | Szolnoki MÁV Hungary | 1243 | 57 1243 |
| 2041 | El Nasr Tadeen Egypt | 1243 | 145 1252 |
| 2042 | Rewa Fiji | 1243 | 57 1243 |
| 2043 | Kabwe Warriors Zambia | 1243 | 56 1243 |
| 2044 | Sportist Svoge Bulgaria | 1243 | 56 1243 |
| 2045 | Erakor Golden Star Vanuatu | 1243 | 86 1241 |
| 2046 | FK Belasica Strumica Macedonia | 1243 | 121 1250 |
| 2047 | Vostok Kazakhstan | 1243 | 55 1243 |
| 2048 | Sabah FK Azerbaijan | 1243 | 123 1250 |
| 2049 | Santos de Angola Angola | 1243 | 54 1243 |
| 2050 | Tadamon Sour Lebanon | 1242 | 37 1249 |